gStore/Util/Util.h

404 lines
12 KiB
C++

/*=============================================================================
# Filename: Util.h
# Author: Bookug Lobert
# Mail: 1181955272@qq.com
# Last Modified: 2015-10-16 10:43
# Description:
1. firstly written by liyouhuan, modified by zengli
2. common macros, functions, classes, etc
# Notice: we only talk about sub-graph isomorphism in the essay, however, in
# this system, the homomorphism is supported.(which means that multiple variables
in the sparql query can point to the same node in data graph)
=============================================================================*/
#ifndef _UTIL_UTIL_H
#define _UTIL_UTIL_H
//basic macros and types are defined here, including common headers
#include <stdio.h>
#include <stdlib.h>
#include <stdbool.h>
#include <limits.h>
#include <dirent.h>
#include <string.h>
#include <unistd.h>
#include <ctype.h>
#include <time.h>
#include <fcntl.h>
#include <errno.h>
#include <regex.h>
#include <locale.h>
#include <assert.h>
#include <libgen.h>
#include <sys/time.h>
#include <sys/types.h>
#include <sys/file.h>
#include <sys/stat.h>
#include <sys/mman.h>
#include <sys/socket.h>
#include <netinet/in.h>
#include <netdb.h>
#include <arpa/inet.h>
//NOTICE:below are restricted to C++, C files should not include(maybe nested) this header!
#include <bitset>
#include <string>
#include <fstream>
#include <iostream>
#include <sstream>
#include <map>
#include <set>
#include <stack>
#include <queue>
#include <vector>
#include <list>
#include <iterator>
#include <algorithm>
#include <functional>
#include <utility>
//NOTICE:below are libraries need to link
#include <pthread.h>
#include <math.h>
#include <readline/readline.h>
#include <readline/history.h>
//if use pthread and lock
//#define THREAD_ON 1
//if use stream module if result is too large than memory can hold
#define STREAM_ON 1
//when used as C/S, if output query result in the server port: default not(you can see the result in the client)
//#define OUTPUT_QUERY_RESULT 1
#define SERVER_SEND_JSON 1
//if to use readline library for console(open by default)
#define READLINE_ON 1
//if to use multiple strategy for answering queries
#define MULTI_INDEX 1
//#define SO2P 1
//#define USE_GROUP_INSERT 1
//#define USE_GROUP_DELETE 1
//indicate that in debug mode
//#define DEBUG_JOIN
//#define DEBUG_STREAM
//#define DEBUG_PRECISE 1 all information
//#define DEBUG_KVSTORE 1 //in KVstore
//#define DEBUG_VSTREE 1 //in Database
//#define DEBUG_LRUCACHE 1
//#define DEBUG_DATABASE 1 //in Database
//
//
#ifdef DEBUG_PRECISE
#ifndef DEBUG
#define DEBUG
#endif
#endif
#ifdef DEBUG_KVSTORE
#ifndef DEBUG
#define DEBUG
#endif
#endif
#ifdef DEBUG_VSTREE
#ifndef DEBUG
#define DEBUG
#endif
#endif
#ifdef DEBUG_DATABASE
#ifndef DEBUG
#define DEBUG
#endif
#endif
#ifdef DEBUG_JOIN
#ifndef DEBUG
#define DEBUG
#endif
#endif
#ifndef DEBUG
//#define DEBUG
#endif
#define xfree(x) free(x); x = NULL;
//NOTICE:include Util.h and below in each main function
//(the beginning position)
//#ifdef DEBUG
// Util util;
//#endif
typedef unsigned(*HashFunction)(const char*);
//NOTICE:hash functions for int are not so many, so we represent int by a 4-byte stringinstead
//(not totally change int to string, which is costly)
//http://www.cppblog.com/aurain/archive/2010/07/06/119463.html
//http://blog.csdn.net/mycomputerxiaomei/article/details/7641221
//http://kb.cnblogs.com/page/189480/
//type for the triple num
//NOTICE: this should use unsigned (triple num may > 2500000000)
typedef unsigned TYPE_TRIPLE_NUM;
//type for entity/literal ID
typedef unsigned TYPE_ENTITY_LITERAL_ID;
static const TYPE_ENTITY_LITERAL_ID INVALID_ENTITY_LITERAL_ID = UINT_MAX;
//static const TYPE_ENTITY_LITERAL_ID INVALID_ENTITY_LITERAL_ID = -1;
//#define INVALID_ENTITY_LITERAL_ID UINT_MAX
//type for predicate ID
typedef int TYPE_PREDICATE_ID;
static const TYPE_PREDICATE_ID INVALID_PREDICATE_ID = -1;
//static const TYPE_PREDICATE_ID INVALID_PREDICATE_ID = -1;
//#define INVALID_PREDICATE_ID -1
//TODO:typedef several ID types and new a ID module
//TODO:encode entity from low to high, encode literal from high to low(finally select the mid of space as border)
//TODO: what is more, the Block ID in kvstore
//typedef unsigned NODE_ID;
//can use `man limits.h` to see more
static const unsigned INVALID = UINT_MAX;
//static const int INVALID = -1;
//#define INVALID UINT_MAX
//NOTICE: always use unsigned for query result matrix
//
//NOTICE: if use define, the type is none
typedef struct TYPE_ID_TUPLE
{
TYPE_ENTITY_LITERAL_ID subid;
TYPE_ENTITY_LITERAL_ID preid;
TYPE_ENTITY_LITERAL_ID objid;
}ID_TUPLE;
/******** all static&universal constants and fucntions ********/
class Util
{
public:
//static int triple_num;
//static int pre_num;
//static int entity_num;
//static int literal_num;
static const unsigned MB = 1048576;
static const unsigned GB = 1073741824;
//static const int TRIPLE_NUM_MAX = 1000*1000*1000;
static const TYPE_TRIPLE_NUM TRIPLE_NUM_MAX = INVALID;
static const char EDGE_IN = 'i';
static const char EDGE_OUT= 'o';
//In order to differentiate the sub-part and literal-part of object
//let subid begin with 0, while literalid begins with LITERAL_FIRST_ID
//used in Database and Join
static const int LITERAL_FIRST_ID = 2 * 1000*1000*1000;
//initial transfer buffer size in Tree/ and Stream/
static const unsigned TRANSFER_SIZE = 1 << 20; //1M
//NOTICE:the larger the faster, but need to care the memory usage(not use 1<<33, negative)
//static const unsigned long long MAX_BUFFER_SIZE = 0xffffffff; //max buffer size in Storage
static const unsigned long long MAX_BUFFER_SIZE = 1 << 30;
//static const unsigned long long MAX_BUFFER_SIZE = 0x1ffffffff; //max buffer size in Storage
//NOTICE:use smaller if saving space, use larger if to be faster
//static const unsigned STORAGE_BLOCK_SIZE = 1 << 10; //fixed size of disk-block in B+ tree storage
static const unsigned STORAGE_BLOCK_SIZE = 1 << 12; //fixed size of disk-block in B+ tree storage
//max block num in kvstore storage, blockNum*blockSize for a B+ tree file should >= 256G
//static const unsigned MAX_BLOCK_NUM = 1 << 26;
//DEBUG:maybe the file size will over if the data is too large
//type of B+ tree
static const int SS_TREE = 0;
static const int SI_TREE = 1;
static const int II_TREE = 2;
static const int IS_TREE = 3;
static int memUsedPercentage();
static int memoryLeft();
static int compare(const char* _str1, unsigned _len1, const char* _str2, unsigned _len2); //QUERY(how to use default args)
static int string2int(std::string s);
static std::string int2string(long n);
//string2str: s.c_str()
//str2string: string(str)
static int compIIpair(int _a1, int _b1, int _a2, int _b2);
static std::string showtime();
static int cmp_int(const void* _i1, const void* _i2);
static int cmp_unsigned(const void* _i1, const void* _i2);
static void sort(unsigned*& _id_list, unsigned _list_len);
static unsigned bsearch_int_uporder(unsigned _key, const unsigned* _array, unsigned _array_num);
static bool bsearch_preid_uporder(TYPE_PREDICATE_ID _preid, unsigned* _pair_idlist, unsigned _list_len);
static unsigned bsearch_vec_uporder(unsigned _key, const std::vector<unsigned>* _vec);
static std::string result_id_str(std::vector<unsigned*>& _v, int _var_num);
static bool dir_exist(const std::string _dir);
static bool create_dir(const std:: string _dir);
static long get_cur_time();
static bool save_to_file(const char*, const std::string _content);
static bool isValidPort(std::string);
static bool isValidIP(std::string);
static std::string getTimeString();
static std::string node2string(const char* _raw_str);
static bool is_literal_ele(TYPE_ENTITY_LITERAL_ID);
static unsigned removeDuplicate(unsigned*, unsigned);
static std::string getQueryFromFile(const char* _file_path);
static std::string getSystemOutput(std::string cmd);
static std::string getExactPath(const char* path);
static std::string getItemsFromDir(std::string path);
static void logging(std::string _str);
static void empty_file(const char* _fname);
// Below are some useful hash functions for string
static unsigned simpleHash(const char *_str);
static unsigned APHash(const char *_str);
static unsigned BKDRHash(const char *_str);
static unsigned DJBHash(const char *_str);
static unsigned ELFHash(const char *_str);
static unsigned DEKHash(const char* _str);
static unsigned BPHash(const char* _str);
static unsigned FNVHash(const char* _str);
static unsigned HFLPHash(const char* _str);
static unsigned HFHash(const char* _str);
static unsigned JSHash(const char *_str);
static unsigned PJWHash(const char *_str);
static unsigned RSHash(const char *_str);
static unsigned SDBMHash(const char *_str);
static unsigned StrHash(const char* _str);
static unsigned TianlHash(const char* _str);
static const unsigned HashNum = 16;
static HashFunction hash[];
static double logarithm(double _a, double _b);
static void intersect(unsigned*& _id_list, unsigned& _id_list_len, const unsigned* _list1, unsigned _len1, const unsigned* _list2, unsigned _len2);
static char* l_trim(char *szOutput, const char *szInput);
static char* r_trim(char *szOutput, const char *szInput);
static char* a_trim(char *szOutput, const char * szInput);
//NOTICE: this function must be called at the beginning of executing!
Util();
~Util();
static std::string profile;
//NOTICE: this function must be called out of any Database to config the basic settings
//You can call it by Util util in the first of your main program
//Another way is to build a GstoreApplication program, and do this configure in the initialization of the application
static bool configure(); //read init.conf and set the parameters for this system
static bool config_setting();
static bool config_advanced();
static bool config_debug();
//static bool gStore_mode;
static std::map<std::string, std::string> global_config;
//static std::string db_home;
//sort functions for qsort
static int _spo_cmp(const void* _a, const void* _b);
static int _ops_cmp(const void* _a, const void* _b);
static int _pso_cmp(const void* _a, const void* _b);
//sort functions for sort on ID_TUPLE
static bool spo_cmp_idtuple(const ID_TUPLE& a, const ID_TUPLE& b);
static bool ops_cmp_idtuple(const ID_TUPLE& a, const ID_TUPLE& b);
static bool pso_cmp_idtuple(const ID_TUPLE& a, const ID_TUPLE& b);
static std::string tmp_path;
// this are for debugging
//to build logs-system, each class: print() in time
static std::string debug_path;
static FILE* debug_kvstore;
static FILE* debug_database;
static FILE* debug_vstree;
private:
static bool isValidIPV4(std::string);
static bool isValidIPV6(std::string);
};
class BlockInfo
{
public:
unsigned num;
BlockInfo* next;
BlockInfo()
{
num = 0;
next = NULL;
}
BlockInfo(unsigned _num)
{
num = _num;
next = NULL;
}
BlockInfo(unsigned _num, BlockInfo* _bp)
{
num = _num;
next = _bp;
}
};
//BETTER+TODO:if considering frequent insert/delete, there maybe too many empty positions, too wasteful!
//A method is to divide as groups, set the base for each, not conflict
//Reproducing the array if needed!
class Buffer
{
public:
unsigned size;
std::string* buffer;
Buffer(unsigned _size)
{
this->size = _size;
this->buffer = new std::string[this->size];
//for(unsigned i = 0; i < this->size; ++i)
//{
//this->buffer[i] = "";
//}
}
bool set(unsigned _pos, const std::string& _ele)
{
if(_pos >= this->size)
{
return false;
}
//BETTER:check if this position is used, and decide abort or update?
this->buffer[_pos] = _ele;
return true;
}
bool del(unsigned _pos)
{
if(_pos >= this->size)
{
return false;
}
this->buffer[_pos] = "";
return true;
}
std::string& get(unsigned _pos) const
{
return this->buffer[_pos];
}
~Buffer()
{
//for(unsigned i = 0; i < size; ++i)
//{
//delete[] buffer[i];
//}
delete[] buffer;
}
};
#endif //_UTIL_UTIL_H