yystopf
/
piflow
forked from opensci/piflow
1
0
Fork 0
Code Issues Pull Requests Releases Wiki Activity

fix bug

This commit is contained in:
judy0131 2018-12-14 17:10:59 +08:00
parent 917ead7e7f
commit 3d48146b99
2 changed files with 4 additions and 4 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

4
piflow-bundle/src/main/scala/cn/piflow/bundle/microorganism/BioSampleParse.scala
View File

@ -8,7 +8,7 @@ import java.util.regex.Pattern
import cn.piflow.bundle.microorganism.util.BioProject
import cn.piflow.conf.bean.PropertyDescriptor
import cn.piflow.conf.util.{ImageUtil, MapUtil}
import cn.piflow.conf.{ConfigurableStop, PortEnum, StopGroupEnum}
import cn.piflow.conf.{ConfigurableStop, PortEnum, StopGroup}
import cn.piflow.{JobContext, JobInputStream, JobOutputStream, ProcessContext}
import org.apache.spark.sql.{Row, SparkSession}
import org.elasticsearch.spark.sql.EsSparkSQL
@ -144,7 +144,7 @@ class BioSampleParse extends ConfigurableStop{
}
override def getGroup(): List[String] = {
List(StopGroupEnum.MicroorganismGroup.toString)
List(StopGroup.MicroorganismGroup.toString)
}
def initialize(ctx: ProcessContext): Unit = {

4
piflow-bundle/src/main/scala/cn/piflow/bundle/microorganism/TaxonomyParse.scala
View File

@ -4,7 +4,7 @@ import java.io._
import cn.piflow.conf.bean.PropertyDescriptor
import cn.piflow.conf.util.{ImageUtil, MapUtil}
import cn.piflow.conf.{ConfigurableStop, PortEnum, StopGroupEnum}
import cn.piflow.conf.{ConfigurableStop, PortEnum, StopGroup}
import cn.piflow.{JobContext, JobInputStream, JobOutputStream, ProcessContext}
import org.apache.spark.sql.{DataFrame, Row, SparkSession}
import org.elasticsearch.spark.sql.EsSparkSQL
@ -271,7 +271,7 @@ class TaxonomyParse extends ConfigurableStop{
}
override def getGroup(): List[String] = {
List(StopGroupEnum.MicroorganismGroup.toString)
List(StopGroup.MicroorganismGroup.toString)
}
def initialize(ctx: ProcessContext): Unit = {